STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATEG_06172Peptidyl-prolyl cis-trans isomerase cyp8. (597 aa)    
Predicted Functional Partners:
ATEG_03703
WD_REPEATS_REGION domain-containing protein.
   
 0.954
ATEG_09468
Cell cycle control protein cwf14.
    
  0.952
ATEG_01957
Pre-mRNA splicing factor cwc22.
   
 0.950
ATEG_01657
PWI domain-containing protein.
    
  0.927
ATEG_09285
SKIP_SNW domain-containing protein.
    
 0.926
ATEG_00761
Uncharacterized protein.
    
 0.924
ATEG_04919
Peptidyl-prolyl cis-trans isomerase cypE.
  
0.920
ATEG_09810
PPIase cyclophilin-type domain-containing protein.
  
0.910
ATEG_05495
ATP-dependent RNA helicase DOB1.
   
  0.909
sub2
ATP-dependent RNA helicase sub2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily.
   
  0.907
Your Current Organism:
Aspergillus terreus
NCBI taxonomy Id: 341663
Other names: A. terreus NIH2624, Aspergillus terreus FGSC A1156, Aspergillus terreus NIH2624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.