STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA01071.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
OQZ95125.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
OQZ95097.1
Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.708
ORA01247.1
Hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.622
OQZ95101.1
Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
OQZ96130.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0232 family.
  
     0.561
OQZ95122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
OQZ95100.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
ORA00241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
ORA01072.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
OQZ98647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.454
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.