STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA01252.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (122 aa)    
Predicted Functional Partners:
ORA01165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.939
OQZ93625.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.896
ORA01172.1
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.845
OQZ92572.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.629
fbiC
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.584
OQZ96566.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.584
OQZ97089.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.583
OQZ96565.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.583
OQZ94018.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.583
OQZ92573.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.583
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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