Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA01268.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
ORA01165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.869
ORA01172.1
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
OQZ93625.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.703
fbiC
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.560
ORA00480.1
Adenylate/guanylate cyclase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 
 0.521
bfr
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
  
 0.454
OQZ97088.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.450
OQZ97089.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.450
OQZ96565.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.450
OQZ96566.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.450
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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