nhaA protein (Mycolicibacter arupensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

nhaA

Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (416 aa)

Predicted Functional Partners:

ORA01179.1

0.746

ORA00357.1

0.653

OQZ93278.1

0.653

ORA01180.1

0.571

OQZ94376.1

0.486

ORA01181.1

0.427

Your Current Organism:

Mycolicibacter arupensis

NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OQZ93278.1	nhaA	BST15_18000	BST15_01215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	0.653
OQZ94376.1	nhaA	BST15_16530	BST15_01215	Mechanosensitive ion channel protein MscL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	0.486
ORA00357.1	nhaA	BST15_04980	BST15_01215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	0.653
ORA01179.1	ORA01180.1	BST15_01220	BST15_01225	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.892
ORA01179.1	ORA01181.1	BST15_01220	BST15_01230	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609
ORA01179.1	nhaA	BST15_01220	BST15_01215	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	0.746
ORA01180.1	ORA01179.1	BST15_01225	BST15_01220	NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.892
ORA01180.1	ORA01181.1	BST15_01225	BST15_01230	NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
ORA01180.1	nhaA	BST15_01225	BST15_01215	NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	0.571
ORA01181.1	ORA01179.1	BST15_01230	BST15_01220	Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609
ORA01181.1	ORA01180.1	BST15_01230	BST15_01225	Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
ORA01181.1	nhaA	BST15_01230	BST15_01215	Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	0.427
nhaA	OQZ93278.1	BST15_01215	BST15_18000	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.653
nhaA	OQZ94376.1	BST15_01215	BST15_16530	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	Mechanosensitive ion channel protein MscL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
nhaA	ORA00357.1	BST15_01215	BST15_04980	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.653
nhaA	ORA01179.1	BST15_01215	BST15_01220	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
nhaA	ORA01180.1	BST15_01215	BST15_01225	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
nhaA	ORA01181.1	BST15_01215	BST15_01230	Pseudouridine synthase; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.	Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427

Server load: medium (48%) [HD]

Permalink

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2025

Credits

Access

Info

About