Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORA00627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)    
Predicted Functional Partners:
ORA00568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.960
OQZ91842.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.959
ORA01113.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.937
nrdE
Ribonucleotide-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.876
OQZ95977.1
Family 65 glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.862
ORA00091.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.802
OQZ95998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.802
ORA00567.1
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.775
ORA01141.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.749
ORA00312.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.749
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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