Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA00601.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (233 aa)    
Predicted Functional Partners:
OQZ94021.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.881
OQZ96563.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.808
OQZ94024.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.783
OQZ94034.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.758
OQZ96589.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.745
OQZ94019.1
MCE-family protein MCE1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.745
OQZ96564.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.731
OQZ94020.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.731
OQZ97088.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.718
OQZ94017.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.718
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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