Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA00352.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)    
Predicted Functional Partners:
OQZ96385.1
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.814
phoU
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
 
    0.765
OQZ99389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
OQZ96380.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
OQZ96641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
OQZ95571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
ORA01066.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
 
     0.609
OQZ98621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
OQZ98590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
OQZ97788.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.573
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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