Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA00274.1Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)    
Predicted Functional Partners:
ORA00272.1
Mycofactocin system protein MftB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.943
ORA00273.1
Mycofactocin radical SAM maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.938
mftF
Mycofactocin system glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.783
ORA00271.1
Mycofactocin precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.750
mftR
Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.709
ORA00275.1
Mycofactocin biosynthesis peptidyl-dipeptidase MftE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.704
ORA01144.1
Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.700
OQZ98518.1
Lactate 2-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.671
ORA00892.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.634
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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