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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mycPType VII secretion-associated serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (435 aa)    
Predicted Functional Partners:
ORA00336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
ORA00361.1
Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
ORA00337.1
Type VII secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.919
ORA00338.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
  
 0.836
eccD
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.827
eccB
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.752
OQZ99892.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.751
BST15_20455
Heavy metal-responsive transcriptional regulator; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.751
whiB-6
Transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
   
    0.712
OQZ90720.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.681
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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