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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA00336.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)    
Predicted Functional Partners:
ORA00361.1
Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
mycP
Type VII secretion-associated serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
  
 0.979
OQZ92237.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.945
ORA00337.1
Type VII secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.939
OQZ94279.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.936
eccB
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.910
OQZ90721.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.910
eccE
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.904
OQZ92023.1
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.904
OQZ99892.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.865
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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