Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BST15_05645Acyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
ORA00219.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.741
OQZ96821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
OQZ99895.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
OQZ97105.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.635
OQZ92184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.621
OQZ97845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
OQZ96112.1
Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.606
ORA00197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.600
OQZ97535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.596
OQZ94015.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.581
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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