Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OQZ98636.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
OQZ99366.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
OQZ96366.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
BST15_03760
Fumarate reductase/succinate dehydrogenase flavoprotein subunit; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.776
OQZ99368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.776
OQZ96367.1
Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.776
OQZ98635.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
ORA01058.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
OQZ98634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
OQZ94669.1
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.596
OQZ98633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.574
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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