Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OQZ98510.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
OQZ98512.1
Formate hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.999
OQZ98511.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
OQZ98579.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.991
OQZ98509.1
Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
nuoB-2
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.983
OQZ98507.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.800
OQZ92496.1
Na+/H+ antiporter subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.739
OQZ98513.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.644
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.411
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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