Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OQZ98532.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
OQZ94608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
ORA00930.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
OQZ97133.1
Bile acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.586
OQZ92850.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
ORA00110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.579
OQZ98190.1
Steroid delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.576
OQZ98533.1
D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.
       0.565
OQZ92851.1
Acyl CoA--acetate/3-ketoacid CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
ORA00040.1
benzoylsuccinyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
ORA00929.1
Sulfotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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