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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ98173.1Thioredoxin domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)    
Predicted Functional Partners:
ORA00780.1
Endoglycoceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.894
OQZ96386.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.894
OQZ94843.1
Endoglycoceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.894
OQZ94826.1
Endoglycoceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.894
OQZ93182.1
Endoglycoceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.894
ORA00197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.814
OQZ98547.1
1,4-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
   
 0.814
OQZ98190.1
Steroid delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.769
ORA00410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.580
ORA00334.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.580
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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