Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OQZ97477.1Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)    
Predicted Functional Partners:
OQZ99925.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.926
OQZ97478.1
PE-PPE domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
OQZ97476.1
Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
OQZ97441.1
D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.514
OQZ99879.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.501
OQZ97831.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
OQZ95583.1
Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.500
OQZ96141.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.499
OQZ94287.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
OQZ99789.1
Geranylgeranyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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