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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ97491.1Twin-arginine translocation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
ORA00987.1
Homocitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
     0.757
OQZ98493.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
OQZ94094.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
OQZ94033.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
BST15_06690
Acyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
OQZ94300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
OQZ95707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
OQZ97177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
OQZ99804.1
Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.679
OQZ94031.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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