STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ97463.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
OQZ97433.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
OQZ97434.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
OQZ96364.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.563
ORA00627.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
OQZ97431.1
Peptidase M1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.514
OQZ97432.1
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
OQZ97436.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.485
OQZ97435.1
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.