Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OQZ97134.1MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
OQZ97094.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
OQZ97092.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.992
OQZ97093.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
OQZ97090.1
MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.986
OQZ97091.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.972
OQZ97088.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
OQZ97089.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.955
OQZ97135.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.932
OQZ99355.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
OQZ93625.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.912
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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