Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OQZ96887.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (881 aa)    
Predicted Functional Partners:
OQZ96886.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.978
OQZ96888.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.973
OQZ96889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
OQZ97445.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.855
OQZ96364.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.761
OQZ97444.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.711
OQZ97466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.680
OQZ99905.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.600
OQZ94822.1
ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.499
OQZ99307.1
Molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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