Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OQZ95546.1 | OQZ95576.1 | BST15_14030 | BST15_14035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.513 |
OQZ95546.1 | vapC-2 | BST15_14030 | BST15_14040 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.513 |
OQZ95576.1 | OQZ95546.1 | BST15_14035 | BST15_14030 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
OQZ95576.1 | vapC-2 | BST15_14035 | BST15_14040 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.989 |
vapC-2 | OQZ95546.1 | BST15_14040 | BST15_14030 | VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
vapC-2 | OQZ95576.1 | BST15_14040 | BST15_14035 | VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.989 |