STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ95019.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
OQZ95018.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 0.999
OQZ95020.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OQZ95021.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ORA00380.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 0.998
ORA00477.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
ORA00382.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.983
OQZ95813.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.983
OQZ95815.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
OQZ95026.1
Suppressor of fused protein (SUFU); Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.878
OQZ95022.1
DUF4199 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.769
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.