Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OQZ94827.1LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
OQZ94618.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
OQZ94622.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.698
OQZ94620.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.616
OQZ94621.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.603
OQZ94612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
ORA00346.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
OQZ94666.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.559
OQZ94828.1
Aminobenzoate oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OQZ94844.1
DUF4873 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
OQZ95705.1
Hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.542
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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