Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OQZ94026.1RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
OQZ94024.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.926
OQZ94021.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.915
OQZ94022.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
OQZ94023.1
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.886
OQZ94019.1
MCE-family protein MCE1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.883
OQZ94028.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.861
OQZ94025.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.846
OQZ94020.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.823
OQZ94027.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.787
OQZ94018.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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