Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OQZ92234.1Type VII secretion protein EsxD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (105 aa)    
Predicted Functional Partners:
OQZ92233.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.954
ORA00338.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
 0.734
ORA00339.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
  0.727
OQZ92236.1
PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.616
OQZ92235.1
PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
OQZ92032.1
Type VII secretion protein EsxS; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.571
OQZ92020.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
  0.571
OQZ90830.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
     
  0.571
OQZ90831.1
Type VII secretion protein EsxS; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.571
OQZ92232.1
ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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