Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OQZ92000.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
OQZ91997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
OQZ92001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.958
OQZ91999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
OQZ91998.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.843
OQZ91996.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.782
OQZ91995.1
RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.775
OQZ92002.1
glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.656
ORA01213.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.554
ORA00597.1
Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.501
Your Current Organism:
Mycolicibacter arupensis
NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097
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