STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0004ATPase involved in chromosome partitioning. (265 aa)    
Predicted Functional Partners:
rsmG
Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.891
amb1502
Predicted transcriptional regulator; Belongs to the ParB family.
 
 
 0.886
mnmG
NAD/FAD-utilizing enzyme apparently involved in cell division; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.716
mnmE
Predicted GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.696
amb0016
DNA segregation ATPase FtsK/SpoIIIE; Related protein.
  
  
 0.647
amb1196
Predicted transcriptional regulator.
  
 
 0.615
amb0452
Hypothetical protein.
 
 
 0.588
amb0363
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.570
amb1160
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.570
amb1195
Predicted transcriptional regulator.
  
 
 0.519
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.