STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0011Uncharacterized conserved protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (157 aa)    
Predicted Functional Partners:
amb0008
Uncharacterized protein; Similar to the N-terminal domain of Lon protease.
       0.773
amb0009
Uncharacterized conserved protein; Belongs to the UPF0434 family.
       0.773
amb0010
Uncharacterized protein conserved in bacteria.
       0.773
amb0007
Thioredoxin domain-containing protein.
       0.751
amb0500
Flagellar motor switch/type III secretory pathway protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.504
amb0505
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.504
fliE
Flagellar hook-basal body protein.
    
   0.504
amb4153
Chemotaxis protein CheC; Inhibitor of MCP methylation.
    
   0.504
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.