STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0019Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (213 aa)    
Predicted Functional Partners:
amb1110
Signal transduction histidine kinase.
  
 
 0.853
amb1841
Hypothetical protein.
  
 
 0.801
amb3438
Sensor protein gacS.
  
 
 0.801
amb4146
Signal transduction histidine kinase.
  
 
 0.801
amb0650
Predicted periplasmic ligand-binding sensor domain.
 
 
 0.795
amb1873
Signal transduction histidine kinase.
  
 
 0.770
amb3243
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.737
amb2895
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.707
amb0651
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.695
amb2293
Signal transduction histidine kinase.
  
 
 0.693
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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