Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb0025Hypothetical PE-PGRS family protein Rv1325c/MT1367 precursor; Msp1. (449 aa)    
Predicted Functional Partners:
amb0026
Hypothetical protein RP420.
 
   
 0.796
amb0319
Hypothetical protein.
  
     0.769
amb3188
Hypothetical protein.
  
     0.762
amb2489
Outer membrane protein.
  
 
 0.760
amb2845
Hypothetical protein.
  
     0.758
amb3189
Hypothetical protein.
  
     0.757
amb3515
Hypothetical protein.
  
     0.755
amb1435
Surface lipoprotein.
 
 
 
 0.754
amb0433
Surface lipoprotein.
 
 
 
 0.753
amb1287
Lysophospholipase.
  
 
 0.732
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.