STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
amb0031NAD-specific glutamate dehydrogenase. (1603 aa)    
Predicted Functional Partners:
amb0521
Glutamate synthase [NADPH] large chain precursor.
     
 0.939
amb2507
Delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.939
amb0696
Glutamine synthetase.
     
 0.928
amb0522
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
     
 0.911
amb0555
Aspartate aminotransferase A; EC 2611.
     
 0.911
amb2332
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
     
 0.911
amb2331
Glutamate synthase domain 2.
     
 0.908
amb0533
NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.905
amb1572
Nitrogenase molybdenum-iron protein alpha and beta chains; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
     
 0.904
amb1573
Nitrogenase molybdenum-iron protein alpha chain.
     
 0.904
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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