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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0037Xanthan biosynthesis protein xanB; Belongs to the mannose-6-phosphate isomerase type 2 family. (464 aa)    
Predicted Functional Partners:
amb0573
Phosphomannomutase.
 
 0.988
amb1077
GDP-D-mannose dehydratase; Nucleoside-diphosphate-sugar epimerase.
 
 
 0.970
amb1076
GDP-D-mannose dehydratase.
 
 
 0.969
pgi
Glucose-6-phosphate isomerase.
  
 
 0.956
amb2976
Transcriptional regulator/sugar kinase.
    
 0.955
fbp
Fructose-1,6-bisphosphatase.
   
 0.947
amb0074
Acetyltransferase; Isoleucine patch superfamily.
  
  
 0.944
amb2734
6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase.
   
 0.939
glmS
Glucosamine 6-phosphate synthetase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.933
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
    
 0.927
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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