Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
amb0040Related Zn-dependent dehydrogenase. (719 aa)    
Predicted Functional Partners:
amb0036
Uncharacterized protein; Conserved in bacteria.
 
     0.819
amb0145
Glycosyltransferase.
 
  
 0.803
amb0037
Xanthan biosynthesis protein xanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
    0.780
amb0041
Inhibitor of the KinA pathway to sporulation; Predicted exonuclease.
       0.773
amb0038
Nucleoside-diphosphate-sugar epimerase.
  
  
 0.754
amb0039
UDP-N-acetylmuramyl pentapeptide phosphotransferase.
  
  
 0.742
amb0102
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.728
amb0045
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.713
amb0043
Uncharacterized protein; Involved in methicillin resistance.
 
     0.705
amb2456
Related to diketogulonate reductase.
  
 
 0.704
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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