Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb0070Predicted Fe-S oxidoreductase. (354 aa)    
Predicted Functional Partners:
amb0071
SAM-dependent methyltransferase.
 
   
 0.928
amb0062
ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
     0.911
amb0067
Putative transketolase C-terminal section.
 
    0.868
amb0066
Putative transketolase N-terminal section.
 
     0.845
amb0063
Nucleoside-diphosphate-sugar epimerase.
 
     0.823
amb0061
UDP-glucose 4-epimerase.
 
     0.818
amb0064
Hypothetical protein.
       0.773
amb0065
Hypothetical protein.
       0.773
amb0068
Hypothetical protein.
       0.773
amb0069
Hypothetical protein.
       0.773
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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