Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb0125Glycosyltransferase; Involved in cell wall biogenesis. (294 aa)    
Predicted Functional Partners:
amb0124
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme.
 
  
 0.870
amb0122
Nucleoside-diphosphate-sugar epimerase.
 
  
 0.799
amb0057
Glycosyltransferase; Involved in cell wall biogenesis.
  
     0.767
amb0101
Glycosyltransferase.
  
 0.719
amb0123
Nucleoside-diphosphate-sugar epimerase.
 
  
 0.660
amb0121
Nucleoside-diphosphate-sugar pyrophosphorylase; eIF-2Bgamma/eIF-2Bepsilon; involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits.
 
 
 0.642
amb0127
Erythromycin biosynthesis sensory transduction protein eryC1; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.615
amb0044
Predicted xylanase/chitin deacetylase.
 
  
 0.613
amb1067
Glycosyltransferase involved in cell wall biogenesis.
  
 0.596
amb0126
Predicted dehydrogenase and related protein.
     
 0.561
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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