STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0132Predicted dehydrogenase and related protein. (346 aa)    
Predicted Functional Partners:
amb0131
Predicted dehydrogenase and related protein.
 
    
0.842
amb0136
Phosphoglycerate dehydrogenase and related dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
   
 0.817
amb0130
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
   
 0.805
amb0129
Hypothetical protein.
       0.776
amb0134
Dehydrogenase with different specificities; Related to short-chain alcohol dehydrogenase.
  
  
 0.768
amb0092
Sialic acid synthase.
  
  
 0.752
amb0133
CMP-2-keto-3-deoxyoctulosonic acid synthetase.
       0.748
amb0135
3-dehydroquinate synthetase.
     
 0.745
amb0138
Predicted dehydrogenase and related protein.
  
     0.614
amb0045
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.535
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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