STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0148Hypothetical protein. (346 aa)    
Predicted Functional Partners:
amb0149
Glycosyltransferase; Involved in cell wall biogenesis.
 
  
 0.924
amb0151
Predicted xylanase/chitin deacetylase.
 
  
 0.820
amb3828
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 
 0.798
amb0150
Glycosyltransferase.
       0.778
amb3816
Hypothetical protein.
  
     0.763
amb3861
Hypothetical protein.
  
     0.750
amb3721
Hypothetical protein.
  
     0.724
amb4480
Hypothetical protein.
 
  
 0.715
amb1418
Predicted membrane protein.
  
 
 
 0.708
amb0152
Uncharacterized conserved protein.
 
     0.705
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.