STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0188Signal transduction histidine kinase. (438 aa)    
Predicted Functional Partners:
amb0189
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.976
amb0190
Predicted membrane protein.
 
  
 0.959
amb1110
Signal transduction histidine kinase.
  
 
 0.767
amb2293
Signal transduction histidine kinase.
  
 
 0.757
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
  
 
 0.725
amb1841
Hypothetical protein.
  
 
 0.705
amb3438
Sensor protein gacS.
  
 
 0.705
amb4146
Signal transduction histidine kinase.
  
 
 0.705
amb0192
Hypothetical protein.
 
   
 0.688
amb1432
Signal transduction histidine kinase.
  
 
 0.649
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.