STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0190Predicted membrane protein. (96 aa)    
Predicted Functional Partners:
amb0188
Signal transduction histidine kinase.
 
  
 0.961
amb0189
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  
 0.881
amb0192
Hypothetical protein.
 
   
 0.769
amb0193
Hypothetical protein.
 
     0.699
amb0191
Hypothetical protein.
       0.538
amb0187
Serine phosphatase RsbU.
       0.518
amb2151
Hemolysins and related protein containing CBS domains.
   
    0.493
amb4466
Hemolysins and related protein containing CBS domains.
   
    0.493
amb0750
Cytochrome b.
 
     0.464
amb0434
ABC-type transport system; Involved in resistance to organic solvents, auxiliary component.
  
   0.454
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.