STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0231TRAP-type uncharacterized transport system; Periplasmic component. (435 aa)    
Predicted Functional Partners:
amb4173
Hypothetical protein.
  
     0.765
amb1418
Predicted membrane protein.
  
     0.746
amb0229
Homolog of Cu resistance protein CopC.
 
     0.724
amb4287
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.721
amb2270
Histone acetyltransferase HPA2 and related acetyltransferase.
  
     0.711
amb0230
Putative copper export protein.
       0.697
amb3421
Hypothetical protein.
  
    0.684
amb4480
Hypothetical protein.
  
     0.684
amb3575
Hypothetical protein.
  
    0.682
amb3677
Hypothetical protein.
  
     0.671
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.