STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0236Hypothetical protein. (156 aa)    
Predicted Functional Partners:
amb3678
Predicted NTPase; NACHT family.
 
     0.685
amb0235
Hypothetical protein.
 
    
0.545
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
 
  
 0.545
amb3888
Cation transport ATPase.
   
  
 0.541
amb2991
Hypothetical protein.
  
     0.513
amb1955
Putative hemolysin.
  
     0.506
amb3409
FOG: TPR repeat.
 
    0.489
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.479
amb1071
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
  
     0.460
amb0007
Thioredoxin domain-containing protein.
    
   0.435
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.