Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb02524-Hydroxy-4-methyl-2-oxoglutarate aldolase. (229 aa)    
Predicted Functional Partners:
amb0251
4-Oxalomesaconate hydratase.
 
  
 0.996
amb0253
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase.
     0.986
amb0250
Uncharacterized protein; Conserved in bacteria.
 
   
 0.962
amb0254
2-pyrone-4,6-dicarbaxylate hydrolase.
 
   
 0.921
amb2550
Thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family.
 
  
  0.914
amb0258
Protocatechuate 4,5-dioxygenase beta chain.
 
   
 0.913
amb0792
Thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family.
    
  0.901
amb3507
Thiamine pyrophosphate-requiring enzyme.
    
  0.901
amb3508
Acetolactate synthase; Small (regulatory) subunit.
     
  0.900
amb0257
Protocatechuate 4,5-dioxygenase alpha chain.
 
   
 0.896
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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