STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb02624-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family. (502 aa)    
Predicted Functional Partners:
amb0261
Membrane-associated phospholipid phosphatase.
 
  
 0.882
amb4205
Glycosyltransferase involved in cell wall biogenesis.
 
  
 0.850
amb0115
Glycosyltransferase; Involved in cell wall biogenesis.
 
  
 0.707
amb0530
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family.
 
     0.659
amb4094
Lauroyl/myristoyl acyltransferase.
 
   
 0.649
amb0228
Glycosyltransferase; Involved in cell wall biogenesis.
 
  
 0.613
amb1082
Glycosyltransferase; Involved in cell wall biogenesis.
 
  
 0.612
amb4091
Uncharacterized protein conserved in bacteria.
  
     0.598
amb2281
Uncharacterized protein conserved in bacteria.
 
  
 0.563
amb0110
Glycosyltransferase; Involved in cell wall biogenesis.
  
  
 0.558
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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