STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0274Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (246 aa)    
Predicted Functional Partners:
amb0273
Signal transduction histidine kinase.
 
 0.996
amb1845
Signal transduction histidine kinase.
 
 0.977
amb4300
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
 0.963
amb4301
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 
0.917
amb1110
Signal transduction histidine kinase.
  
 
 0.853
amb1873
Signal transduction histidine kinase.
 
 
 0.831
amb2636
Signal transduction histidine kinase.
 
 
 0.817
amb0290
Signal transduction histidine kinase.
 
 0.810
amb1841
Hypothetical protein.
  
 
 0.801
amb3438
Sensor protein gacS.
  
 
 0.801
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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