amb0321 protein (Magnetospirillum magneticum)

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Score

amb0321

Ribosomal protein L28. (55 aa)

Predicted Functional Partners:

rpmG

0.991

rpsT

0.989

rpmF

0.989

rpsU

0.989

rplU

0.989

rpsR

0.988

rpsF

0.988

rpsN

0.988

rplM

0.987

rplS

0.987

Your Current Organism:

Magnetospirillum magneticum

NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
amb0321	rplM	amb0321	amb3557	Ribosomal protein L28.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.987
amb0321	rplS	amb0321	amb4066	Ribosomal protein L28.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.987
amb0321	rplU	amb0321	amb4077	Ribosomal protein L28.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.989
amb0321	rpmF	amb0321	amb2352	Ribosomal protein L28.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.989
amb0321	rpmG	amb0321	amb3569	Ribosomal protein L28.	Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.991
amb0321	rpsF	amb0321	amb2103	Ribosomal protein L28.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.988
amb0321	rpsN	amb0321	amb3117	Ribosomal protein L28.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.988
amb0321	rpsR	amb0321	amb2101	Ribosomal protein L28.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.988
amb0321	rpsT	amb0321	amb0635	Ribosomal protein L28.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
amb0321	rpsU	amb0321	amb2820	Ribosomal protein L28.	Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.989
rplM	amb0321	amb3557	amb0321	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L28.	0.987
rplM	rplS	amb3557	amb4066	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.992
rplM	rplU	amb3557	amb4077	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmF	amb3557	amb2352	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.986
rplM	rpmG	amb3557	amb3569	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.988
rplM	rpsF	amb3557	amb2103	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.988
rplM	rpsN	amb3557	amb3117	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.991
rplM	rpsR	amb3557	amb2101	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.992
rplM	rpsT	amb3557	amb0635	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplM	rpsU	amb3557	amb2820	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.984

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