STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0337Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily. (264 aa)    
Predicted Functional Partners:
amb0336
Hypothetical protein.
       0.701
amb0338
Glycosyltransferase.
  
  
 0.696
amb0339
ADP-heptose of LPS heptosyltransferase.
       0.684
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
 
 0.683
amb0041
Inhibitor of the KinA pathway to sporulation; Predicted exonuclease.
  
     0.553
amb2350
CBP3 protein, mitochondrial precursor.
  
     0.553
thrS
Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
  
    0.548
amb2819
Uncharacterized conserved protein.
  
 
 
 0.547
infC
Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
 
     0.526
amb0009
Uncharacterized conserved protein; Belongs to the UPF0434 family.
  
    0.480
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.