STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0352Hypothetical protein. (267 aa)    
Predicted Functional Partners:
amb0356
DNA or RNA helicase of superfamily II.
 
     0.897
amb0355
Hypothetical protein.
 
     0.892
amb0358
Hypothetical protein.
 
     0.891
amb0350
Hypothetical protein.
       0.778
amb0351
Hypothetical protein.
       0.778
amb0353
Hypothetical protein.
       0.751
amb1147
Hypothetical protein.
 
     0.728
amb0359
Hypothetical protein.
 
    0.675
amb0361
Hypothetical protein.
 
     0.673
amb0345
Hypothetical protein.
 
     0.646
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.