STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0358Hypothetical protein. (757 aa)    
Predicted Functional Partners:
amb0355
Hypothetical protein.
 
     0.950
amb0356
DNA or RNA helicase of superfamily II.
 
     0.949
amb0352
Hypothetical protein.
 
     0.891
amb0354
Hypothetical protein.
       0.793
amb0357
Hypothetical protein.
       0.793
amb0361
Hypothetical protein.
 
     0.788
amb0359
Hypothetical protein.
 
     0.765
amb1147
Hypothetical protein.
 
     0.728
amb1157
Hypothetical protein.
 
     0.689
amb1156
Hypothetical protein.
 
     0.631
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.