STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0382Hypothetical protein. (319 aa)    
Predicted Functional Partners:
amb0383
Hypothetical protein.
 
     0.949
amb0381
Hypothetical protein.
 
     0.929
amb0385
Phage-related minor tail protein.
 
     0.849
amb0379
Hypothetical protein.
 
     0.787
amb1176
Hypothetical protein.
 
     0.787
amb1177
Hypothetical protein.
 
     0.787
amb1179
Hypothetical protein.
 
     0.787
amb1175
Hypothetical protein.
 
     0.784
amb1169
Bacteriophage tail assembly protein.
 
     0.774
amb0368
Hypothetical protein.
  
     0.773
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.